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National Institute of Allergy and Infectious Disease
NIH 3D
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NIH3D

Crystal structure of double-stranded DNA deaminase toxin DddA in complex with DNA with the target cytosine flipped into the active site

PDB 8E5E
was used by NIH 3D workflows to automatically generate models for
Pombeer
Created:
9/23/25
Submitted:
10/7/26
Published:
10/7/26
thin ribbon, secondary structure
8e5e-ribbon-thin-secondaryThin ribbon representation colored by secondary structure (a-helix: blue, B-sheet: red, coil: yellow).

Select an image below to view

thin ribbon, secondary structurethin ribbon, rainbowthin ribbon, by chainthin ribbon, no colorthick ribbon, secondary structure, print cautionthick ribbon, rainbow, print cautionthick ribbon, by chain, print cautionthick ribbon, no color, NIH 3D repaired

lo-res mol surface, by chainlo-res mol surface, hydrophobicitylo-res mol surface, coulombiclo-res mol surface, no colorhi-res mol surface, by chain, print cautionhi-res mol surface, hydrophobicity, print cautionhi-res mol surface, coulombic, print cautionhi-res mol surface, no color, print caution

Learn more about NIH 3D workflow outputs

3DPX-022963

NIH 3D DOI:

https://doi.org/10.60705/3dpx/22963.2

Licensing:

CC-BY
How to cite this NIH 3D entry
222
84
Version 2

Category

Biomacromolecules
Biomacromolecules
Description
PDB Classification: TOXIN/DNA
Source Data Details
Attribution Instructions